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    Home » Recipes » muffins

    High Protein Chocolate Chip Muffins

    This post may contain affiliate links.

    These high protein chocolate chip muffins make a great breakfast option for busy mornings, a great after school snack for sports on the go, or a yummy treat! They are loaded with real food ingredients and have extra protein to help you reach your protein goals.

    chocolate chip muffins stacked on a plate

    These muffins taste similar to a regular chocolate chip muffin but are packed with more protein and have added healthy ingredients. You can also pronounce everything in them which is always a plus!

    This was inspired by my high protein chocolate strawberry muffins on this site, and pairs well with a creamy hot morning coffee.

    Jump to:
    • Ingredients
    • Instructions
    • Substitutions
    • Variations
    • Equipment
    • Storage
    • Top Tip
    • FAQ
    • Similar Recipes
    • High Protein Recipes
    • Favorite Things
    • 📖Recipe
    • 💭Comments

    Ingredients

    This recipe uses real food ingredients that contribute to your health instead of working against it. I don't know about you, but as I have gotten older and had children, I have become a label reader and it is WILD to see how many ingredients prepackaged food has! I honestly have no idea what some of their ingredients are and I can't pronounce them. These high protein chocolate chip muffins are an easy snack that you can feel good about because you know what's in them.

    ingredients needed for high protein chocolate chip muffins
    • Cottage Cheese + unflavored protein powder for moisture and added protein
    • Honey + Maple Syrup for flavor and sweetness
    • Avocado oil for moisture

    See recipe card for full list of ingredients and quantities.

    Instructions

    These high protein chocolate chip muffins are easy to make with just a blender. Start by pre heating your oven to 350℉ and gathering everything you need.

    1. Step 1: Combine all of the wet ingredients into your blender or food processor. You want the wet ingredients in the bottom because they won't stick like the dry ingredients once you blend.
    1. Step 2: Add all of your dry ingredients, other than your chocolate chips, on top and blend until smooth.
    1. Step 3: Stir in your chocolate chips.
    1. Step 4: Divide your batter into 12 muffin liners and bake for about 18 minutes or until tops get a little browned.

    This is what your muffins should look like when they are done.

    Hint: In the oven they will look tall but when you pull them out, they will fall down and crinkle a little bit as they cool. They should be firm but not hard once cooled.

    Substitutions

    You can make this recipe your own.

    • All purpose flour - instead of using ½ cup of almond flour, you can use the full 1.5 cups of all purpose flour.
    • Protein Powder- You can add unflavored protein powder for some extra protein. I do about two or 3 "serving" scoops. You don't need to change anything else whether you do or do not add it. I have made it both ways several times.

    Variations

    You can witch up the flavors by adding different chocolate chips. I prefer to use dark chocolate but you can use semi-sweet chocolate chips or milk chocolate chips. Hershey also makes a cinnamon chocolate chip that would be tasty.

    You could also switch up the flavor of protein powder you use. Strawberry protein powder would probably be very good with dark chocolate chips.

    You can find a similar recipe that is a chocolate strawberry flavor here.

    Equipment

    You will need a blender or food processor for this recipe. I have this one, which includes both, and love it. It is my second set because I used the other one to death.

    Storage

    You can store these in a ziploc bag on the counter for 3-4 days. I have found that most muffins also freeze very well in an airtight container for several months. I'm not an expert in freezing food, but we almost always freeze our extra muffins. They always thaw out just as delicious as they were fresh.

    Top Tip

    Don't worry if the tops fall when you take them out of the oven. Give them awhile to cool off and settle.

    FAQ

    Can I use protein powder for these muffins

    Yes, I like to use 2-3 "serving size" scoops. I prefer unflavored.

    Can I make these without all purpose flour using just almond flour?

    No, it would change the texture too much. They would likely be very crumbly and not feel like they have enough "substance" to hold them together.

    Similar Recipes

    After you have tried these high protein chocolate chip muffins, try some of my other muffin recipes:

    • Lemon Poppy Seed Muffins
      Easy Lemon Poppy Seed Muffins From Scratch
    • Banana Pumpkin Muffins
      Banana Pumpkin Muffins
    • Sourdough Chocolate Muffins
      Quick Chocolate Sourdough Discard Muffins
    • Sourdough discard banana muffins
      The Best Sourdough Discard Banana Muffins

    High Protein Recipes

    Meet your protein goals with these other high protein recipes:

    • high protein tuna salad in a bowl next to a sandwich bun
      High Protein Tuna Salad
    • Greek Yogurt Protein Whips
      Quick and Easy Protein Mousse
    • High Protein Chopped Pecan Chicken Salad
      High Protein Chopped Pecan Chicken Salad
    • Cottage Cheese Cookie Dough
      Viral Cottage Cheese Cookie Dough

    Favorite Things

    • Best muffin liners
    • Find all of my favorite items here.
    • Some of these links may be affiliate links, where I make a small commission on qualifying items, at no extra cost to you. Thank you for your support!

    📖Recipe

    chocolate chip muffins

    High protein Chocolate Chip Muffins

    These high protein chocolate chip muffins make a great breakfast option for busy mornings, a great after school snack for sports on the go, or a yummy treat! They are loaded with real food ingredients and have extra protein to help you reach your protein goals.
    5 from 8 votes
    Print Recipe Pin Recipe
    Prep Time 5 minutes mins
    Cook Time 18 minutes mins
    Course Breakfast, Dessert, Snack
    Cuisine American
    Servings 12 people

    Equipment

    • 1 Food Processor or blender
    • measuring cups
    • measuring spoons
    • muffin tin
    • muffin liners
    • spatula
    • spoon or cookie scoop to divide batter

    Ingredients
      

    • 1 Cup Cottage Cheese
    • ¼ Cup Avocado Oil
    • 2 lg eggs
    • ¼ Cup Almond milk
    • 1 teaspoon vanilla extract
    • ¼ Cup Honey
    • 1 Cup all purpose flour
    • ½ Cup Almond Flour
    • ½ teaspoon salt
    • 1.5 teaspoon baking powder
    • ½ Cup Chocolate Chips dark, adjust amount to your preference
    • 2-3 scoops protein powder, unflavored optional

    Instructions
     

    • Gather everything you need and preheat your oven to 350℉.
    • Add all of the wet ingredients to your blender or food processor, then add in all of your dry ingredients, except the chocolate chips.
      Blend until just smooth.
      Once blended, stir in your chocolate chips. Divide into 12 muffin liners and bake for about 18 minutes or until the tops are slightly golden brown.

    Notes

    If you aren't sure if the muffins are fully baked: They should be firm but not hard or too browned on the tops. These muffins will puff up in the oven and when you take them out, they will fall a little bit and the tops will crinkle.    Give them  a little while to cool before eating.  Enjoy!
    Keyword high protein, high protein breakfast, High Protein Snacks
    Tried this recipe?Let us know how it was!

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    Reader Interactions

    Comments

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      Recipe Rating




    1. Emily says

      June 09, 2025 at 9:24 am

      These look so good! Love that they’re packed with protein but still feel like a treat, perfect for busy mornings or post-workout snacks. Can’t wait to try them!

      Reply
    2. Annabelle says

      June 12, 2025 at 8:04 am

      5 stars
      These are the perfect on-the-go snack for kids! Perfect for the playground or to take to the splash pad.

      Reply
    3. Lydia says

      June 12, 2025 at 8:10 am

      5 stars
      I love how these are packed with protein! Also, how fast you can make them. I will have to try these!!

      Reply
    4. Kirsten from Multiply the Five Blog says

      June 12, 2025 at 9:15 am

      5 stars
      Yum, excited for these! Tasty and healthy, count me in!

      Reply
    5. Penny says

      June 12, 2025 at 9:24 am

      5 stars
      These protein chocolate chips muffins are amazing! They make the perfect late afternoon pick-me-up snack!

      Reply
    6. Hailey says

      June 12, 2025 at 9:33 am

      5 stars
      Love that these use cottage cheese instead of solely protein powder. A delicious recipe!

      Reply
    7. Heidi says

      June 12, 2025 at 10:12 am

      5 stars
      Love the high protein feature in these muffins and the added cottage cheese. They look delicious and would be so great to have for breakfast or a healthy snack that counts. Awesome recipe!❤️

      Reply
    8. Kelly Letalien says

      June 12, 2025 at 10:40 am

      5 stars
      I can’t wait try these! I am always looking for high protein treats! These look delicious! Thanks for sharing!

      Reply
    9. Jenni from An Exciting Day Blog says

      June 12, 2025 at 11:04 am

      I’ve never used cottage cheese in my baking before and I think I’m missing out! These high protein chocolate chip muffins are next on my list to bake!

      Reply
    10. Ophelie says

      June 12, 2025 at 6:39 pm

      5 stars
      I 100% want to try these!!

      Reply

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    Hi, I'm Alisha. I'm a wife and also a mom to a couple awesome kids that keep me very busy. I enjoy spending time in the kitchen creating good food. I use this site for my own personal recipe book. While I love food, you'll find some other stuff here as well. I love to work on our home, share finds and diys, homeschool, and many other things.

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